__init__(self, molecule, basis, freqs=None, init=None): 

Sets up a vibration for a Molecule object over the CoordinateSystem basis

• molecule: AbstractMolecule

• init: None | CoordinateSet

• basis: MolecularNormalModes

change_mol(self, mol): 

@property
basis(self): 

@property
molecule(self): 

@property
freqs(self): 

@property
coords(self): 

• :returns: CoordinateSet

__len__(self): 

displace(self, displacements=None, amt=0.1, n=1, which=0): 

Displaces along the vibrational mode specified by which

• displacements: Any

• amt: Any

• n: Any

• which: Any

• :returns: _

visualize(self, step_size=5, steps=(2, 2), which=0, anim_opts=None, mode='fast', **plot_args): 

• step_size: Any

• steps: Any

• which: Any

• anim_opts: Any

• mode: Any

• plot_args: Any

• :returns: _

to_widget(self): 

__getitem__(self, item): 

Takes a slice of the modes

• item: Any

• :returns: _

embed(self, frame): 

• frame: MolecularTransformation

• :returns: _

rescale(self, scaling): 

Multiplies each mode by some scaling factor

• phases: Any

• :returns: _

rotate(self, scaling): 

Multiplies each mode by some scaling factor

• phases: Any

• :returns: _

__repr__(self):